WormBase Tree Display for Feature: WBsf160621
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| WBsf160621 | SMap | S_parent | Sequence | Y110A2AL | ||
|---|---|---|---|---|---|---|
| Sequence_details | Flanking_sequences | TTTTCTAAAATTAAAGAATTCTAAAATCTC | GATGCTCTTTCAAATTATAAATGCTGTGAT | |||
| Mapping_target | Y110A2AL | |||||
| Source_location | 190 | CHROMOSOME_II | 2845411 | 2845410 | ||
| Origin | Species | Caenorhabditis elegans | ||||
| Visible | Description | polyA_site defined by RNASeq short reads (Hillier et al.) | ||||
| Defined_by | Defined_by_sequence | elegans_PE_SS_GG3486|c7_g1_i1 | Inferred_automatically | make_missing_tsl_features.pl | ||
| elegans_PE_SS_GG3486|c7_g1_i2 | Inferred_automatically | make_missing_tsl_features.pl | ||||
| Defined_by_paper | WBPaper00037808 | |||||
| WBPaper00037948 | ||||||
| Defined_by_analysis | RNASeq_Hillier.L3_larva | |||||
| RNASeq_Hillier.Young_Adult | ||||||
| RNASeq_Hillier.L4_larva | ||||||
| RNASeq_Hillier.early_embryo | ||||||
| RNASeq_Hillier.late_embryo | ||||||
| RNASeq_Fire.all_stages_ssRNALigSeq | ||||||
| Associations | Associated_with_transcript | Y110A2AL.8a.1 | ||||
| Y110A2AL.8b.1 | ||||||
| Remark | [110125 gw3] This polyA_site feature was defined by the Bartel paper. | |||||
| Bartel data confident_cleavagesite score: 386.0 | ||||||
| Method | polyA_site |
