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WormBase Tree Display for Feature: WBsf017438

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Name Class

WBsf017438SMapS_parentSequenceC05C12
Sequence_detailsFlanking_sequencesATGACAGAAATATAAACTGGTTCTTTTGTCATTGGGAAAAACTGATAAGAGCATTTTTTT
Mapping_targetC05C12
Source_location190CHROMOSOME_IV1124885511248854
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionpolyA site
SO_termSO:0000553
Defined_byDefined_by_sequenceAJ276019Inferred_automaticallyfind_missing_polya_feature_data.pl
make_missing_tsl_features.pl
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_polyA_IV_11248854_+_wb170
mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_polyA_IV_11248854_+_wb170
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_IV_11248854_+_wb170
mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_polyA_IV_11248854_+_wb170
elegans_PE_SS_GG3841|c0_g1_i1Inferred_automaticallymake_missing_tsl_features.pl
Defined_by_paperWBPaper00037808
Defined_by_personWBPerson2620
Defined_by_analysisRNASeq_Hillier.L1_larva
RNASeq_Hillier.L2_larva
RNASeq_Hillier.L3_larva
RNASeq_Hillier.L4_larva
AssociationsAssociated_with_transcriptC05C12.3.1
Remark[110125 gw3] This polyA_site feature was defined by the Bartel paper.
Bartel data confident_cleavagesite score: 325.0
MethodpolyA_site