WormBase Tree Display for Variation: WBVar02147705
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| WBVar02147705 | Evidence | Paper_evidence | WBPaper00051108 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | k1024 | |||||
| Other_name | CE30535:p.Arg92Ter | ||||||
| F46F11.6.1:c.274C>T | |||||||
| HGVSg | CHROMOSOME_I:g.5617971G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F46F11 | |||
| Flanking_sequences | ggaagagttgtgagcagaatggtggagttt | gaggaacctcactgtgagtattctttgttc | |||||
| Mapping_target | F46F11 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00051108 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | MJ | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00018509 | |||||
| Transcript | F46F11.6.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F46F11.6.1:c.274C>T | ||||||
| HGVSp | CE30535:p.Arg92Ter | ||||||
| cDNA_position | 412 | ||||||
| CDS_position | 274 | ||||||
| Protein_position | 92 | ||||||
| Exon_number | 5/10 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | I | 0.275285 | ||||
| Reference | WBPaper00051108 | ||||||
| Method | Substitution_allele |
