WormBase Tree Display for Variation: WBVar02144417
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| WBVar02144417 | Evidence | Paper_evidence | WBPaper00046810 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | jj63 | |||||
| Other_name | CE25974:p.Trp347Ter | ||||||
| R13F6.9.1:c.1040G>A | |||||||
| HGVSg | CHROMOSOME_III:g.6861549C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | R13F6 | |||
| Flanking_sequences | tgaaacttcgataaacaaattttcagggct | gggagaagattatccacgtcaagacgtcac | |||||
| Mapping_target | R13F6 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00046810 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | LW | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00004857 | |||||
| Transcript | R13F6.9.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | R13F6.9.1:c.1040G>A | ||||||
| HGVSp | CE25974:p.Trp347Ter | ||||||
| cDNA_position | 1045 | ||||||
| CDS_position | 1040 | ||||||
| Protein_position | 347 | ||||||
| Exon_number | 12/14 | ||||||
| Codon_change | tGg/tAg | ||||||
| Amino_acid_change | W/* | ||||||
| Genetics | Interpolated_map_position | III | -0.918052 | ||||
| Reference | WBPaper00046810 | ||||||
| Remark | jj63 is a W349Stop allele | Paper_evidence | WBPaper00046810 | ||||
| Method | Substitution_allele |
