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WormBase Tree Display for Variation: WBVar02139816

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Name Class

WBVar02139816EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh14466
Other_nameB0563.6b.1:c.86-3C>T
B0563.6b.2:c.86-3C>T
B0563.6a.1:c.113-3C>T
B0563.6c.1:c.113-3C>T
HGVSgCHROMOSOME_X:g.9142197C>T
Sequence_detailsSMapS_parentSequenceB0563
Flanking_sequencesCAAAAGTTTACGGAAACAGGAAAATGAAACGTATTTCTTAAGGTATTGTTGGAAATATCACAAATTTGATGGTTCTTGCA
Mapping_targetCHROMOSOME_X
Source_location200CHROMOSOME_X91421339142133
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023861
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00015263
TranscriptB0563.6a.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0563.6a.1:c.113-3C>T
Intron_number3/8
B0563.6b.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0563.6b.2:c.86-3C>T
Intron_number3/8
B0563.6b.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0563.6b.1:c.86-3C>T
Intron_number2/7
B0563.6c.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0563.6c.1:c.113-3C>T
Intron_number2/8
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose