WormBase Tree Display for Variation: WBVar02139535

WBVar02139535 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12700
    Other_name: B0403.4.1:c.537C>T
      CE03880:p.Leu179=
    HGVSg: CHROMOSOME_X:g.7067376G>A
  Sequence_details: SMap: S_parent: Sequence: B0403
    Flanking_sequences: ATGGGGCAAAGAACTCGACAAGCCAGATATCCTTGCTGTT AGAACGAGATCCTCGAAGTTGGCATCAGTAAGTTCAACAA
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 7067326 7067326
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023858
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00015168
    Transcript: B0403.4.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: B0403.4.1:c.537C>T
        HGVSp: CE03880:p.Leu179=
        cDNA_position: 660
        CDS_position: 537
        Protein_position: 179
        Exon_number: 4/6
        Codon_change: ctC/ctT
        Amino_acid_change: L
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose