WormBase Tree Display for Variation: WBVar02139480

WBVar02139480 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h3872
    Other_name: C56E10.3a.1:c.1777+22C>T
      C56E10.3b.1:c.1456+22C>T
    HGVSg: CHROMOSOME_X:g.6651541C>T
  Sequence_details: SMap: S_parent: Sequence: C56E10
    Flanking_sequences: GCGCTGTTGAAACCCTATGGTAAAATTTGTTAGTACAAAA TCTATTAAAACATATTTGATTTCAGATGAGGAGTATCAGG
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 6651498 6651498
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023877
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00016976
    Transcript: C56E10.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56E10.3a.1:c.1777+22C>T
        Intron_number: 15/16
      C56E10.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56E10.3b.1:c.1456+22C>T
        Intron_number: 12/12
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose