WormBase Tree Display for Variation: WBVar02139428
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WBVar02139428 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h18291 | ||||
Other_name | T07H6.5c.1:c.1451-673T>C | |||||
T07H6.5a.1:c.1451-673T>C | ||||||
T07H6.5b.1:c.1451-673T>C | ||||||
HGVSg | CHROMOSOME_X:g.6287718A>G | |||||
Sequence_details | SMap | S_parent | Sequence | T07H6 | ||
Flanking_sequences | AGTGCAACTTAAATTGGTCAGTGCAACTGCAACTGGTCAGTGCAACTTAAATTGGTCAGTGCAACTGCAACTGGTCAGTGCAACTTAAATTGGTCAGTGCAACTGCAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCAGTGCACTGCAACTGGTCAGTGCACT | CAACTGGTCAGTGCACTGCAACTGGTCAGTGCACTACAACTGGTCATGGTCAGTGCACTGCAACTGGTCAGTGCACTAAT | ||||
Mapping_target | CHROMOSOME_X | |||||
Source_location | 200 | CHROMOSOME_X | 6287676 | 6287676 | ||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023671 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00002976 | ||||
Transcript | T07H6.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | T07H6.5b.1:c.1451-673T>C | |||||
Intron_number | 10/28 | |||||
T07H6.5a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T07H6.5a.1:c.1451-673T>C | |||||
Intron_number | 10/13 | |||||
T07H6.5c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T07H6.5c.1:c.1451-673T>C | |||||
Intron_number | 9/12 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |