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WormBase Tree Display for Variation: WBVar02139036

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Name Class

WBVar02139036EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh15015
Other_nameF56B6.2b.1:c.1826+612T>C
F56B6.2i.1:c.1943+612T>C
F56B6.2e.1:c.452+612T>C
F56B6.2j.1:c.1946+612T>C
F56B6.2h.1:c.1952+612T>C
F56B6.2c.1:c.752+612T>C
F56B6.2a.1:c.1937+612T>C
HGVSgCHROMOSOME_X:g.3553538T>C
Sequence_detailsSMapS_parentSequenceF56B6
Flanking_sequencesAAAAATTGGCAACGAAATGAAGTCATGATTTTTATTTTGGAGAACTTAGTGGTTTCTTTTGTTCATTAGTATGTTGTTAT
Mapping_targetCHROMOSOME_X
Source_location200CHROMOSOME_X35535263553526
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023767
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00004350
TranscriptF56B6.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2j.1:c.1946+612T>C
Intron_number11/14
F56B6.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2e.1:c.452+612T>C
Intron_number3/7
F56B6.2i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2i.1:c.1943+612T>C
Intron_number12/16
F56B6.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2b.1:c.1826+612T>C
Intron_number11/15
F56B6.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2a.1:c.1937+612T>C
Intron_number12/16
F56B6.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2h.1:c.1952+612T>C
Intron_number12/16
F56B6.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2c.1:c.752+612T>C
Intron_number6/9
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose