WormBase Tree Display for Variation: WBVar02136656
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| WBVar02136656 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h5171 | ||||
| Other_name | C37C3.6a.2:c.1929G>A | |||||
| CE17535:p.Glu643= | ||||||
| C37C3.6a.1:c.1929G>A | ||||||
| CE30735:p.Glu643= | ||||||
| CE17536:p.Glu643= | ||||||
| C37C3.6c.1:c.1929G>A | ||||||
| C37C3.6b.1:c.1929G>A | ||||||
| HGVSg | CHROMOSOME_V:g.7830134G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | C37C3 | ||
| Flanking_sequences | CTGAGAAGCCAGAAGGAAAGACTAACTGCACCAATGAGGA | AAGTGTACTGGAACATGGTACACATCTTCATGGTCCGAGT | ||||
| Mapping_target | CHROMOSOME_V | |||||
| Source_location | 200 | CHROMOSOME_V | 7830115 | 7830115 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023679 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00003242 | ||||
| Transcript | C37C3.6b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | C37C3.6b.1:c.1929G>A | |||||
| HGVSp | CE17536:p.Glu643= | |||||
| cDNA_position | 2001 | |||||
| CDS_position | 1929 | |||||
| Protein_position | 643 | |||||
| Exon_number | 9/20 | |||||
| Codon_change | gaG/gaA | |||||
| Amino_acid_change | E | |||||
| C37C3.6a.2 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | C37C3.6a.2:c.1929G>A | |||||
| HGVSp | CE17535:p.Glu643= | |||||
| cDNA_position | 1939 | |||||
| CDS_position | 1929 | |||||
| Protein_position | 643 | |||||
| Exon_number | 9/18 | |||||
| Codon_change | gaG/gaA | |||||
| Amino_acid_change | E | |||||
| C37C3.6a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | C37C3.6a.1:c.1929G>A | |||||
| HGVSp | CE17535:p.Glu643= | |||||
| cDNA_position | 1997 | |||||
| CDS_position | 1929 | |||||
| Protein_position | 643 | |||||
| Exon_number | 9/18 | |||||
| Codon_change | gaG/gaA | |||||
| Amino_acid_change | E | |||||
| C37C3.6c.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | C37C3.6c.1:c.1929G>A | |||||
| HGVSp | CE30735:p.Glu643= | |||||
| cDNA_position | 2012 | |||||
| CDS_position | 1929 | |||||
| Protein_position | 643 | |||||
| Exon_number | 9/12 | |||||
| Codon_change | gaG/gaA | |||||
| Amino_acid_change | E | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
