WormBase Tree Display for Variation: WBVar02136553

WBVar02136553 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h15227
    Other_name: T19F4.1a.1:c.*183C>T
      T19F4.1b.1:c.*83C>T
      T19F4.1c.1:c.*183C>T
    HGVSg: CHROMOSOME_V:g.6873653C>T
  Sequence_details: SMap: S_parent: Sequence: T19F4
    Flanking_sequences: CTTTATTATTATTATCGCCAATTTCTTCCTATGCACCGAT TTTCCAAGCTTTCTTCCATACGAACAATTCCAAATTCCAA
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 6873635 6873635
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023875
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00020586
    Transcript: T19F4.1b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1b.1:c.*83C>T
        cDNA_position: 1388
        Exon_number: 11/11
      T19F4.1a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1a.1:c.*183C>T
        cDNA_position: 1419
        Exon_number: 11/11
      T19F4.1c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1c.1:c.*183C>T
        cDNA_position: 1293
        Exon_number: 9/9
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose