WormBase Tree Display for Variation: WBVar02135733

WBVar02135733 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12802
    Other_name: F16B4.5a.2:c.-809G>A
      F16B4.5b.1:c.191-834G>A
      F16B4.5a.1:c.-52-757G>A
    HGVSg: CHROMOSOME_V:g.1590642G>A
  Sequence_details: SMap: S_parent: Sequence: F16B4
    Flanking_sequences: TGGCCGAGTTTTTCCATTTTCTAGGCAATTTTTAGAAAAT TAAAAATTGGTGGCCGATGCTATATTTCTAGGAAGAATTT
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 1590643 1590643
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023862
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00017507
    Transcript: F16B4.5a.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F16B4.5a.2:c.-809G>A
        cDNA_position: 2015
        Exon_number: 2/5
      F16B4.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16B4.5b.1:c.191-834G>A
        Intron_number: 3/4
      F16B4.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16B4.5a.1:c.-52-757G>A
        Intron_number: 2/5
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose