WormBase Tree Display for Variation: WBVar02135256
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WBVar02135256 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h3797 | ||||
Other_name | CE24657:p.Trp135Ter | |||||
Y73F8A.23.1:c.404G>A | ||||||
HGVSg | CHROMOSOME_IV:g.15443540C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y73F8A | ||
Flanking_sequences | CTGGAAATCAAATGTCCATTGTGCCATTCCATTTATGTCC | ATTCAGTTATTTCGTACTTATATGCAACTGTTTCAGACTG | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 15443500 | 15443500 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023877 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00013528 | ||||
Transcript | Y73F8A.23.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | |||||
HGVSc | Y73F8A.23.1:c.404G>A | |||||
HGVSp | CE24657:p.Trp135Ter | |||||
cDNA_position | 404 | |||||
CDS_position | 404 | |||||
Protein_position | 135 | |||||
Exon_number | 4/6 | |||||
Codon_change | tGg/tAg | |||||
Amino_acid_change | W/* | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |