WormBase Tree Display for Variation: WBVar02135030
expand all nodes | collapse all nodes | view schema
WBVar02135030 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h14588 | ||||
Other_name | H08M01.2c.1:c.1335+130C>T | |||||
H08M01.2d.1:c.408+130C>T | ||||||
H08M01.2b.1:c.3759+130C>T | ||||||
HGVSg | CHROMOSOME_IV:g.13843454C>T | |||||
Sequence_details | SMap | S_parent | Sequence | H08M01 | ||
Flanking_sequences | ATTTAAAATCAAAATGTCGATCAGGAATTATATCATGAAA | TTTCAGGGTATGACCAAAAAAATTAAGAGAGTAATTTTAT | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 13843421 | 13843421 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023876 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00010374 | ||||
Transcript | H08M01.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | H08M01.2c.1:c.1335+130C>T | |||||
Intron_number | 10/11 | |||||
H08M01.2d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | H08M01.2d.1:c.408+130C>T | |||||
Intron_number | 4/5 | |||||
H08M01.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | H08M01.2b.1:c.3759+130C>T | |||||
Intron_number | 20/22 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |