WormBase Tree Display for Variation: WBVar02135022
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WBVar02135022 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h17456 | ||||
Other_name | Y45F10D.13d.1:c.2940G>A | |||||
CE44448:p.Lys978= | ||||||
CE53354:p.Lys448= | ||||||
Y45F10D.13a.1:c.2934G>A | ||||||
CE53254:p.Lys980= | ||||||
Y45F10D.13e.1:c.1344G>A | ||||||
CE39436:p.Lys446= | ||||||
Y45F10D.13c.1:c.1338G>A | ||||||
HGVSg | CHROMOSOME_IV:g.13770267G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y45F10D | ||
Flanking_sequences | TCCAATTGTACACGAACGATATCATTTTTGTAGTGGAAAA | TGTGATGATGGATGGTTTATTGGTACATCTTTACGAACCG | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 13770234 | 13770234 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023797 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00012891 | ||||
Transcript | Y45F10D.13d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y45F10D.13d.1:c.2940G>A | |||||
HGVSp | CE53254:p.Lys980= | |||||
cDNA_position | 2943 | |||||
CDS_position | 2940 | |||||
Protein_position | 980 | |||||
Exon_number | 14/15 | |||||
Codon_change | aaG/aaA | |||||
Amino_acid_change | K | |||||
Y45F10D.13c.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y45F10D.13c.1:c.1338G>A | |||||
HGVSp | CE39436:p.Lys446= | |||||
cDNA_position | 1338 | |||||
CDS_position | 1338 | |||||
Protein_position | 446 | |||||
Exon_number | 8/8 | |||||
Codon_change | aaG/aaA | |||||
Amino_acid_change | K | |||||
Y45F10D.13e.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y45F10D.13e.1:c.1344G>A | |||||
HGVSp | CE53354:p.Lys448= | |||||
cDNA_position | 1344 | |||||
CDS_position | 1344 | |||||
Protein_position | 448 | |||||
Exon_number | 8/8 | |||||
Codon_change | aaG/aaA | |||||
Amino_acid_change | K | |||||
Y45F10D.13a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y45F10D.13a.1:c.2934G>A | |||||
HGVSp | CE44448:p.Lys978= | |||||
cDNA_position | 2936 | |||||
CDS_position | 2934 | |||||
Protein_position | 978 | |||||
Exon_number | 14/15 | |||||
Codon_change | aaG/aaA | |||||
Amino_acid_change | K | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |