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WormBase Tree Display for Variation: WBVar02135022

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Name Class

WBVar02135022EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh17456
Other_nameY45F10D.13d.1:c.2940G>A
CE44448:p.Lys978=
CE53354:p.Lys448=
Y45F10D.13a.1:c.2934G>A
CE53254:p.Lys980=
Y45F10D.13e.1:c.1344G>A
CE39436:p.Lys446=
Y45F10D.13c.1:c.1338G>A
HGVSgCHROMOSOME_IV:g.13770267G>A
Sequence_detailsSMapS_parentSequenceY45F10D
Flanking_sequencesTCCAATTGTACACGAACGATATCATTTTTGTAGTGGAAAATGTGATGATGGATGGTTTATTGGTACATCTTTACGAACCG
Mapping_targetCHROMOSOME_IV
Source_location200CHROMOSOME_IV1377023413770234
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023797
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00012891
TranscriptY45F10D.13d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY45F10D.13d.1:c.2940G>A
HGVSpCE53254:p.Lys980=
cDNA_position2943
CDS_position2940
Protein_position980
Exon_number14/15
Codon_changeaaG/aaA
Amino_acid_changeK
Y45F10D.13c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY45F10D.13c.1:c.1338G>A
HGVSpCE39436:p.Lys446=
cDNA_position1338
CDS_position1338
Protein_position446
Exon_number8/8
Codon_changeaaG/aaA
Amino_acid_changeK
Y45F10D.13e.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY45F10D.13e.1:c.1344G>A
HGVSpCE53354:p.Lys448=
cDNA_position1344
CDS_position1344
Protein_position448
Exon_number8/8
Codon_changeaaG/aaA
Amino_acid_changeK
Y45F10D.13a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY45F10D.13a.1:c.2934G>A
HGVSpCE44448:p.Lys978=
cDNA_position2936
CDS_position2934
Protein_position978
Exon_number14/15
Codon_changeaaG/aaA
Amino_acid_changeK
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose