WormBase Tree Display for Variation: WBVar02134769
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WBVar02134769 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h12788 | ||||
Other_name | ZK617.1g.1:c.54+158G>A | |||||
ZK617.1b.1:c.54+158G>A | ||||||
ZK617.1a.1:c.54+158G>A | ||||||
ZK617.1h.1:c.54+158G>A | ||||||
ZK617.1f.1:c.54+158G>A | ||||||
ZK617.23:n.271C>T | ||||||
ZK617.1i.1:c.54+158G>A | ||||||
HGVSg | CHROMOSOME_IV:g.12010669C>T | |||||
Sequence_details | SMap | S_parent | Sequence | ZK617 | ||
Flanking_sequences | CAGACGCGCAGATACATACACGGGATCCCGCAATCATTTG | CATGAGCCATGTGGCTATGCACAGGGCATTGGGCTCAAGA | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 12010638 | 12010638 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023862 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00006759 | ||||
WBGene00201849 | ||||||
Transcript | ZK617.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1h.1:c.54+158G>A | |||||
Intron_number | 1/33 | |||||
ZK617.1i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1i.1:c.54+158G>A | |||||
Intron_number | 1/32 | |||||
ZK617.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1a.1:c.54+158G>A | |||||
Intron_number | 2/32 | |||||
ZK617.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1g.1:c.54+158G>A | |||||
Intron_number | 1/31 | |||||
ZK617.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1f.1:c.54+158G>A | |||||
Intron_number | 1/30 | |||||
ZK617.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1b.1:c.54+158G>A | |||||
Intron_number | 1/33 | |||||
ZK617.23 | VEP_consequence | non_coding_transcript_exon_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.23:n.271C>T | |||||
cDNA_position | 271 | |||||
Exon_number | 1/1 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |