WormBase Tree Display for Variation: WBVar02134415
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| WBVar02134415 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h14934 | ||||
| Other_name | F59B8.1a.3:c.147-83C>T | |||||
| F59B8.1b.1:c.93-83C>T | ||||||
| F59B8.1a.2:c.147-83C>T | ||||||
| F59B8.1a.5:c.147-83C>T | ||||||
| F59B8.1a.4:c.147-83C>T | ||||||
| F59B8.1c.1:c.156-83C>T | ||||||
| F59B8.1e.1:c.219-83C>T | ||||||
| F59B8.1d.1:c.168-83C>T | ||||||
| F59B8.1a.1:c.147-83C>T | ||||||
| HGVSg | CHROMOSOME_IV:g.9437767C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | F59B8 | ||
| Flanking_sequences | CTCTTTTTTGTTACCTTTGCAAGAACGATTGACTTTTTTT | TTTATGAAAGATTGTTGAAGGAACTCAAACCAATTATATT | ||||
| Mapping_target | CHROMOSOME_IV | |||||
| Source_location | 200 | CHROMOSOME_IV | 9437744 | 9437744 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023767 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00010316 | ||||
| Transcript | F59B8.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1c.1:c.156-83C>T | |||||
| Intron_number | 3/7 | |||||
| F59B8.1b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1b.1:c.93-83C>T | |||||
| Intron_number | 2/7 | |||||
| F59B8.1a.3 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1a.3:c.147-83C>T | |||||
| Intron_number | 4/9 | |||||
| F59B8.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1a.1:c.147-83C>T | |||||
| Intron_number | 3/8 | |||||
| F59B8.1a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1a.2:c.147-83C>T | |||||
| Intron_number | 4/9 | |||||
| F59B8.1a.5 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1a.5:c.147-83C>T | |||||
| Intron_number | 4/9 | |||||
| F59B8.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1e.1:c.219-83C>T | |||||
| Intron_number | 3/7 | |||||
| F59B8.1a.4 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1a.4:c.147-83C>T | |||||
| Intron_number | 4/9 | |||||
| F59B8.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F59B8.1d.1:c.168-83C>T | |||||
| Intron_number | 3/7 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
