WormBase Tree Display for Variation: WBVar02134405
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| WBVar02134405 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h17630 | ||||
| Other_name | C10C5.1b.1:c.2284+1840C>T | |||||
| C10C5.1e.1:c.2404+1840C>T | ||||||
| C10C5.1k.1:c.142+1840C>T | ||||||
| C10C5.1h.1:c.2296+1840C>T | ||||||
| C10C5.1f.1:c.2290+1840C>T | ||||||
| C10C5.1g.1:c.2410+1840C>T | ||||||
| C10C5.1a.1:c.2398+1840C>T | ||||||
| C10C5.1d.1:c.2290+1840C>T | ||||||
| C10C5.1c.1:c.2404+1840C>T | ||||||
| HGVSg | CHROMOSOME_IV:g.9357606G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | T20D3 | ||
| Flanking_sequences | TGAACTCGCTGAGCTTCAGATTTCGAATTCAACGCGGTAA | ATATAAAGGAATACTTAGAATTCAGCCATCGTTCTATATA | ||||
| Mapping_target | CHROMOSOME_IV | |||||
| Source_location | 200 | CHROMOSOME_IV | 9357583 | 9357583 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023704 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00007505 | ||||
| Transcript | C10C5.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1f.1:c.2290+1840C>T | |||||
| Intron_number | 17/33 | |||||
| C10C5.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1e.1:c.2404+1840C>T | |||||
| Intron_number | 17/32 | |||||
| C10C5.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1d.1:c.2290+1840C>T | |||||
| Intron_number | 17/33 | |||||
| C10C5.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1a.1:c.2398+1840C>T | |||||
| Intron_number | 18/34 | |||||
| C10C5.1b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1b.1:c.2284+1840C>T | |||||
| Intron_number | 17/33 | |||||
| C10C5.1h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1h.1:c.2296+1840C>T | |||||
| Intron_number | 16/31 | |||||
| C10C5.1g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1g.1:c.2410+1840C>T | |||||
| Intron_number | 17/32 | |||||
| C10C5.1k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1k.1:c.142+1840C>T | |||||
| Intron_number | 1/16 | |||||
| C10C5.1c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C10C5.1c.1:c.2404+1840C>T | |||||
| Intron_number | 17/32 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
