WormBase Tree Display for Variation: WBVar02133890
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WBVar02133890 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h6193 | ||||
Other_name | F41H10.6b.1:c.372G>A | |||||
CE25887:p.Leu124= | ||||||
CE20772:p.Leu124= | ||||||
CE41132:p.Leu126= | ||||||
F41H10.6a.1:c.372G>A | ||||||
F41H10.6c.1:c.378G>A | ||||||
HGVSg | CHROMOSOME_IV:g.5363757C>T | |||||
Sequence_details | SMap | S_parent | Sequence | F41H10 | ||
Flanking_sequences | CAAAACCATTCGAAGCTTCATTAGCCATGATTCTATTCGT | AAATCTCGAACACACGCGACACCATCTTTGGCAACTTTCA | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 5363746 | 5363746 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023699 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00018319 | ||||
Transcript | F41H10.6a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F41H10.6a.1:c.372G>A | |||||
HGVSp | CE20772:p.Leu124= | |||||
cDNA_position | 457 | |||||
CDS_position | 372 | |||||
Protein_position | 124 | |||||
Exon_number | 4/11 | |||||
Codon_change | ttG/ttA | |||||
Amino_acid_change | L | |||||
F41H10.6b.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | F41H10.6b.1:c.372G>A | |||||
HGVSp | CE25887:p.Leu124= | |||||
cDNA_position | 434 | |||||
CDS_position | 372 | |||||
Protein_position | 124 | |||||
Exon_number | 4/12 | |||||
Codon_change | ttG/ttA | |||||
Amino_acid_change | L | |||||
F41H10.6c.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | F41H10.6c.1:c.378G>A | |||||
HGVSp | CE41132:p.Leu126= | |||||
cDNA_position | 440 | |||||
CDS_position | 378 | |||||
Protein_position | 126 | |||||
Exon_number | 4/12 | |||||
Codon_change | ttG/ttA | |||||
Amino_acid_change | L | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |