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WormBase Tree Display for Variation: WBVar02133615

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Name Class

WBVar02133615EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh14412
Other_nameY37E11B.2.5:c.-160-1G>A
Y37E11B.2.6:c.-153G>A
Y37E11B.2.3:c.-156-1G>A
Y37E11B.2.1:c.-164-1G>A
Y37E11B.2.7:c.-213G>A
Y37E11B.2.4:c.-152-1G>A
Y37E11B.2.2:c.-212-1G>A
HGVSgCHROMOSOME_IV:g.3578625G>A
Sequence_detailsSMapS_parentSequenceY37E11B
Flanking_sequencesGTTATACATACGATTTATTCTGACAATATAAAAATGTTCACTTAATTGGAAACTTCGGAGATATGCAATGCATAGTAGCA
Mapping_targetCHROMOSOME_IV
Source_location200CHROMOSOME_IV35786203578620
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023861
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00021375
TranscriptY37E11B.2.2VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY37E11B.2.2:c.-212-1G>A
Intron_number1/4
Y37E11B.2.5VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY37E11B.2.5:c.-160-1G>A
Intron_number1/5
Y37E11B.2.7VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY37E11B.2.7:c.-213G>A
cDNA_position62
Exon_number1/4
Y37E11B.2.4VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY37E11B.2.4:c.-152-1G>A
Intron_number1/5
Y37E11B.2.6VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY37E11B.2.6:c.-153G>A
cDNA_position166
Exon_number1/5
Y37E11B.2.3VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY37E11B.2.3:c.-156-1G>A
Intron_number1/5
Y37E11B.2.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY37E11B.2.1:c.-164-1G>A
Intron_number1/5
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose