WormBase Tree Display for Variation: WBVar02133530

WBVar02133530 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h15932
    Other_name: Y54G2A.25a.1:c.1429-377C>T
      Y54G2A.57.1:c.31+197G>A
    HGVSg: CHROMOSOME_IV:g.2970237G>A
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: TATACATAGGCATGCAGACAGGCAGGCAGGCACAAAATAG CACGTAGGTTTGAGCCCGCCTAACATGGAAAAAGGTTAGG
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 2970234 2970234
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023749
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00002243
      WBGene00189961
    Transcript: Y54G2A.25a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.25a.1:c.1429-377C>T
        Intron_number: 10/23
      Y54G2A.57.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.57.1:c.31+197G>A
        Intron_number: 3/11
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose