WormBase Tree Display for Variation: WBVar02133523

WBVar02133523 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h5433
    Other_name: CE34413:p.Gln113Ter
      Y54G2A.22.1:c.337C>T
    HGVSg: CHROMOSOME_IV:g.2921640G>A
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: ATTAATCGATCGGTAAGCGACGACCAATTCCGTACATATT AACCATGAACTTCTTGAAGGATTCCGGCAGCTCAGGTACA
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 2921637 2921637
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023896
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021887
    Transcript: Y54G2A.22.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y54G2A.22.1:c.337C>T
        HGVSp: CE34413:p.Gln113Ter
        cDNA_position: 351
        CDS_position: 337
        Protein_position: 113
        Exon_number: 4/6
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose