WormBase Tree Display for Variation: WBVar02133350

WBVar02133350 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h16667
    Other_name: CE31647:p.Arg47=
      Y41D4B.12a.2:c.396G>A
      Y41D4B.12b.1:c.141G>A
      CE27623:p.Arg132=
      Y41D4B.12a.1:c.396G>A
    HGVSg: CHROMOSOME_IV:g.1603383G>A
  Sequence_details: SMap: S_parent: Sequence: Y41D4B
    Flanking_sequences: AATACGCTGGGGAATGTATTGGCGAGCAAGAAGTTGAACG AGATGTCGAGAATTCCGAGGAGACGATAATTATACGCTTA
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 1603381 1603381
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023759
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021515
    Transcript: Y41D4B.12b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y41D4B.12b.1:c.141G>A
        HGVSp: CE31647:p.Arg47=
        cDNA_position: 347
        CDS_position: 141
        Protein_position: 47
        Exon_number: 3/6
        Codon_change: cgG/cgA
        Amino_acid_change: R
      Y41D4B.12a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y41D4B.12a.1:c.396G>A
        HGVSp: CE27623:p.Arg132=
        cDNA_position: 399
        CDS_position: 396
        Protein_position: 132
        Exon_number: 2/5
        Codon_change: cgG/cgA
        Amino_acid_change: R
      Y41D4B.12a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y41D4B.12a.2:c.396G>A
        HGVSp: CE27623:p.Arg132=
        cDNA_position: 1727
        CDS_position: 396
        Protein_position: 132
        Exon_number: 2/5
        Codon_change: cgG/cgA
        Amino_acid_change: R
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose