WormBase Tree Display for Variation: WBVar02133270

WBVar02133270 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h6616
    Other_name: Y55F3AL.1d.1:c.632-222C>T
      Y55F3AL.1c.1:c.632-222C>T
      Y55F3AL.1b.1:c.1199-222C>T
      Y55F3AL.1a.1:c.1199-222C>T
    HGVSg: CHROMOSOME_IV:g.967679C>T
  Sequence_details: SMap: S_parent: Sequence: Y55F3AL
    Flanking_sequences: TCATGCCGATTAACGAAAGTTTTTCTGTAGGTTTATGGAG TCTGTGTAGATATACGGGGCGATTTTTGTGTAGATTTACG
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 967679 967679
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023687
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00004047
    Transcript: Y55F3AL.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1d.1:c.632-222C>T
        Intron_number: 3/20
      Y55F3AL.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1b.1:c.1199-222C>T
        Intron_number: 6/24
      Y55F3AL.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1a.1:c.1199-222C>T
        Intron_number: 6/24
      Y55F3AL.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1c.1:c.632-222C>T
        Intron_number: 3/20
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose