WormBase Tree Display for Variation: WBVar02133261

WBVar02133261 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h10780
    Other_name: F58H7.1.1:c.150C>T
      CE52103:p.Ile50=
      F58H7.3.1:c.622-1092G>A
    HGVSg: CHROMOSOME_IV:g.935550G>A
  Sequence_details: SMap: S_parent: Sequence: F58H7
    Flanking_sequences: ATATTGTTATAGAAACCCTCTTACCCTGTTTAGTTGTGGT ATGATAACCTGGGTCTCCTCGACCTCAATATCCTCAATAT
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 935550 935550
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023787
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00019067
      WBGene00019069
    Transcript: F58H7.3.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F58H7.3.1:c.622-1092G>A
        Intron_number: 6/13
      F58H7.1.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F58H7.1.1:c.150C>T
        HGVSp: CE52103:p.Ile50=
        cDNA_position: 276
        CDS_position: 150
        Protein_position: 50
        Exon_number: 2/10
        Codon_change: atC/atT
        Amino_acid_change: I
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose