WormBase Tree Display for Variation: WBVar02133227

WBVar02133227 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h10287
    Other_name: CE32538:p.Ser175=
      CE32539:p.Ser175=
      Y55F3C.7b.1:c.525C>T
      Y55F3C.7a.1:c.525C>T
    HGVSg: CHROMOSOME_IV:g.700308G>A
  Sequence_details: SMap: S_parent: Sequence: Y55F3C
    Flanking_sequences: TTCCGCCGACTGGTTGGGCGATGCATTGGCCAACGAAGAA CTGTACGAGTTTTGCTGGGTGCTCGGCAAGGGACGGATCT
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 700308 700308
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023777
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021950
    Transcript: Y55F3C.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y55F3C.7a.1:c.525C>T
        HGVSp: CE32538:p.Ser175=
        cDNA_position: 551
        CDS_position: 525
        Protein_position: 175
        Exon_number: 5/10
        Codon_change: agC/agT
        Amino_acid_change: S
      Y55F3C.7b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y55F3C.7b.1:c.525C>T
        HGVSp: CE32539:p.Ser175=
        cDNA_position: 525
        CDS_position: 525
        Protein_position: 175
        Exon_number: 4/9
        Codon_change: agC/agT
        Amino_acid_change: S
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose