WormBase Tree Display for Variation: WBVar02133122

WBVar02133122 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12769
    Other_name: B0545.1a.1:c.678+11C>T
      B0545.1b.3:c.267+11C>T
      B0545.1b.2:c.267+11C>T
      B0545.1b.1:c.267+11C>T
    HGVSg: CHROMOSOME_IV:g.104282C>T
  Sequence_details: SMap: S_parent: Sequence: B0545
    Flanking_sequences: GGAAGTGCAAAGAATACAAAGGAGACTATGGTGAGTTGGG TCTAGATCTAGATTTTGAACTTTTTTATAGTGTTACCTAC
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 104282 104282
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023862
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006599
    Transcript: B0545.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0545.1b.1:c.267+11C>T
        Intron_number: 8/13
      B0545.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0545.1a.1:c.678+11C>T
        Intron_number: 7/12
      B0545.1b.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0545.1b.3:c.267+11C>T
        Intron_number: 3/8
      B0545.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0545.1b.2:c.267+11C>T
        Intron_number: 6/10
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose