WormBase Tree Display for Variation: WBVar02133047

WBVar02133047 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h17265
    Other_name: F53A2.8a.1:c.*105C>T
      F53A2.8c.1:c.*105C>T
      F53A2.8b.1:c.*105C>T
    HGVSg: CHROMOSOME_III:g.13355565C>T
  Sequence_details: SMap: S_parent: Sequence: F53A2
    Flanking_sequences: CTTTTTAATTTTTACCTTGTATCAAATTTTATATATTTCC CATGCCCACCGAAATGCTTGTGATCACTTTTTGTATATTT
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 13355446 13355446
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023866
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00003478
    Transcript: F53A2.8c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A2.8c.1:c.*105C>T
        cDNA_position: 2150
        Exon_number: 10/10
      F53A2.8b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A2.8b.1:c.*105C>T
        cDNA_position: 2471
        Exon_number: 10/10
      F53A2.8a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53A2.8a.1:c.*105C>T
        cDNA_position: 2156
        Exon_number: 10/10
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose