WormBase Tree Display for Variation: WBVar02132569

WBVar02132569 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h11240
    Other_name: K03H1.10.2:c.224-3C>T
      K03H1.10.1:c.224-3C>T
      F40F12.7.2:c.*7-975C>T
    HGVSg: CHROMOSOME_III:g.9923621C>T
  Sequence_details: SMap: S_parent: Sequence: K03H1
    Flanking_sequences: TCACTGCTTCAGCTACTACCTCACAAACTAAAAAAACGTT AGTCGCTCATTGTGCATCGTCTCGTCAAATAATAGCTCAC
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 9923518 9923518
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023880
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00009595
      WBGene00010545
      WBGene00305411
      WBGene00305410
      WBGene00305409
    Transcript: F40F12.13
      K03H1.10.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: K03H1.10.1:c.224-3C>T
        Intron_number: 3/7
      F40F12.12
      K03H1.10.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: K03H1.10.2:c.224-3C>T
        Intron_number: 3/6
      F40F12.14
      F40F12.7.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F40F12.7.2:c.*7-975C>T
        Intron_number: 7/7
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose