WormBase Tree Display for Variation: WBVar02132435
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| WBVar02132435 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h15904 | ||||
| Other_name | F54F2.2a.3:c.2430+69G>A | |||||
| F54F2.2a.7:c.2430+69G>A | ||||||
| F54F2.2a.5:c.2430+69G>A | ||||||
| F54F2.2a.1:c.2430+69G>A | ||||||
| F54F2.2a.6:c.2430+69G>A | ||||||
| F54F2.2c.2:c.1734+69G>A | ||||||
| F54F2.2c.1:c.1734+69G>A | ||||||
| F54F2.2a.2:c.2430+69G>A | ||||||
| F54F2.2a.4:c.2430+69G>A | ||||||
| HGVSg | CHROMOSOME_III:g.8805122G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | F54F2 | ||
| Flanking_sequences | AAAATTTTTTGTATCGAACTGTATTGCACAGATTTTTTGA | ATGGGTCTTGACAAAAAAAAGTTTATGGTGGTGTTGTATT | ||||
| Mapping_target | CHROMOSOME_III | |||||
| Source_location | 200 | CHROMOSOME_III | 8805029 | 8805029 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023749 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00006975 | ||||
| Transcript | F54F2.2a.6 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.6:c.2430+69G>A | |||||
| Intron_number | 11/12 | |||||
| F54F2.2a.3 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.3:c.2430+69G>A | |||||
| Intron_number | 16/17 | |||||
| F54F2.2c.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2c.2:c.1734+69G>A | |||||
| Intron_number | 5/6 | |||||
| F54F2.2c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2c.1:c.1734+69G>A | |||||
| Intron_number | 6/7 | |||||
| F54F2.2a.7 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.7:c.2430+69G>A | |||||
| Intron_number | 11/12 | |||||
| F54F2.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.1:c.2430+69G>A | |||||
| Intron_number | 10/11 | |||||
| F54F2.2a.4 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.4:c.2430+69G>A | |||||
| Intron_number | 15/16 | |||||
| F54F2.2a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.2:c.2430+69G>A | |||||
| Intron_number | 14/15 | |||||
| F54F2.2a.5 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F54F2.2a.5:c.2430+69G>A | |||||
| Intron_number | 14/15 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
