WormBase Tree Display for Variation: WBVar02132211

WBVar02132211 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h7969
    Other_name: CE29296:p.Pro289Ser
      CE29297:p.Pro334Ser
      F28F5.3b.1:c.1000C>T
      F28F5.3a.1:c.865C>T
      CE30771:p.Pro384Ser
      F28F5.3c.1:c.1150C>T
    HGVSg: CHROMOSOME_III:g.6810752C>T
  Sequence_details: SMap: S_parent: Sequence: F28F5
    Flanking_sequences: ACCCAACTCAACCACTCGAATCTATCATGCTGTGGATATT CATTTGATGAATCTCCAGCCAGTTACTATCCAAAACAAAA
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 6810689 6810689
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023680
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00017904
    Transcript: F28F5.3b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F28F5.3b.1:c.1000C>T
        HGVSp: CE29297:p.Pro334Ser
        cDNA_position: 1000
        CDS_position: 1000
        Protein_position: 334
        Exon_number: 5/16
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      F28F5.3a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F28F5.3a.1:c.865C>T
        HGVSp: CE29296:p.Pro289Ser
        cDNA_position: 937
        CDS_position: 865
        Protein_position: 289
        Exon_number: 6/18
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
      F28F5.3c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F28F5.3c.1:c.1150C>T
        HGVSp: CE30771:p.Pro384Ser
        cDNA_position: 1165
        CDS_position: 1150
        Protein_position: 384
        Exon_number: 9/20
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose