WormBase Tree Display for Variation: WBVar02132197
expand all nodes | collapse all nodes | view schema
| WBVar02132197 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h5276 | ||||
| Other_name | C13B9.4a.1:c.-23+1260C>T | |||||
| C13B9.4e.1:c.-23+1260C>T | ||||||
| C13B9.4a.2:c.-23+1260C>T | ||||||
| C13B9.4d.1:c.-23+1260C>T | ||||||
| C13B9.4c.2:c.-23+1260C>T | ||||||
| C13B9.4b.3:c.-23+1260C>T | ||||||
| C13B9.4c.1:c.-23+1260C>T | ||||||
| C13B9.4b.1:c.-23+1260C>T | ||||||
| HGVSg | CHROMOSOME_III:g.6649709G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | M01G4 | ||
| Flanking_sequences | GATGGAACAAGAAAGTTTCAAGAAGTCTTTAAGGAAACAT | AATGAGTGGTCCATCATTAAAGTGAATAGAAAGAAGGAAA | ||||
| Mapping_target | CHROMOSOME_III | |||||
| Source_location | 200 | CHROMOSOME_III | 6649649 | 6649649 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023668 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00015735 | ||||
| Transcript | C13B9.4b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4b.3:c.-23+1260C>T | |||||
| Intron_number | 3/18 | |||||
| C13B9.4a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4a.2:c.-23+1260C>T | |||||
| Intron_number | 3/18 | |||||
| C13B9.4e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4e.1:c.-23+1260C>T | |||||
| Intron_number | 1/15 | |||||
| C13B9.4c.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4c.2:c.-23+1260C>T | |||||
| Intron_number | 3/18 | |||||
| C13B9.4b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4b.1:c.-23+1260C>T | |||||
| Intron_number | 1/16 | |||||
| C13B9.4c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4c.1:c.-23+1260C>T | |||||
| Intron_number | 1/16 | |||||
| C13B9.4d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4d.1:c.-23+1260C>T | |||||
| Intron_number | 1/16 | |||||
| C13B9.4a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C13B9.4a.1:c.-23+1260C>T | |||||
| Intron_number | 1/16 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
