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WormBase Tree Display for Variation: WBVar02132156

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Name Class

WBVar02132156EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh13926
Other_nameCE52511:p.Gln468=
C56G2.1e.1:c.1122G>A
CE52470:p.Gln454=
C56G2.1d.1:c.1404G>A
C56G2.1a.1:c.1422G>A
C56G2.1c.1:c.1362G>A
CE52570:p.Gln374=
CE24866:p.Gln474=
HGVSgCHROMOSOME_III:g.6358604G>A
Sequence_detailsSMapS_parentSequenceC56G2
Flanking_sequencesAACATCATGAGAACGAAGCTGGAGACGCTGCCCACGCTCAATTATCGAATCTCCACATCACGAGAATGCGAGCTACGAGA
Mapping_targetCHROMOSOME_III
Source_location200CHROMOSOME_III63585486358548
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023886
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00016977
TranscriptC56G2.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC56G2.1d.1:c.1404G>A
HGVSpCE52511:p.Gln468=
cDNA_position1404
CDS_position1404
Protein_position468
Exon_number10/15
Codon_changecaG/caA
Amino_acid_changeQ
C56G2.1c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC56G2.1c.1:c.1362G>A
HGVSpCE52470:p.Gln454=
cDNA_position1362
CDS_position1362
Protein_position454
Exon_number9/14
Codon_changecaG/caA
Amino_acid_changeQ
C56G2.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC56G2.1a.1:c.1422G>A
HGVSpCE24866:p.Gln474=
cDNA_position1520
CDS_position1422
Protein_position474
Exon_number11/17
Codon_changecaG/caA
Amino_acid_changeQ
C56G2.1e.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC56G2.1e.1:c.1122G>A
HGVSpCE52570:p.Gln374=
cDNA_position1122
CDS_position1122
Protein_position374
Exon_number9/15
Codon_changecaG/caA
Amino_acid_changeQ
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose