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WormBase Tree Display for Variation: WBVar02132042

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Name Class

WBVar02132042EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh17258
Other_nameR02F2.1c.1:c.20-793G>A
R02F2.1b.1:c.20-793G>A
R02F2.1a.1:c.20-793G>A
HGVSgCHROMOSOME_III:g.5503842G>A
Sequence_detailsSMapS_parentSequenceR02F2
Flanking_sequencesTATTAACTATTTTGAATTAGCGCCAAAATAAAAAGGAGGCGAGCAAAAACCGTGCCGCACTTTGCATACTGCAAGGCGGC
Mapping_targetCHROMOSOME_III
Source_location200CHROMOSOME_III55038005503800
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023866
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00019831
TranscriptR02F2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1b.1:c.20-793G>A
Intron_number2/6
R02F2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1c.1:c.20-793G>A
Intron_number2/5
R02F2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR02F2.1a.1:c.20-793G>A
Intron_number2/6
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose