WormBase Tree Display for Variation: WBVar02131404

WBVar02131404 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h15881
    Other_name: F42G9.5a.1:c.547-226G>A
      F42G9.5b.2:c.-6-226G>A
    HGVSg: CHROMOSOME_III:g.777231C>T
  Sequence_details: SMap: S_parent: Sequence: F42G9
    Flanking_sequences: TTTATTTAAATTTTTCGAAAAATCAACAAAAAAGTTTTGT AATCTTTTCAAGTTTTTTAATTAAATTTTTTTTTTTCGAA
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 777226 777226
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023749
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00000117
    Transcript: F42G9.5b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G9.5b.2:c.-6-226G>A
        Intron_number: 1/7
      F42G9.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G9.5a.1:c.547-226G>A
        Intron_number: 2/8
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose