WormBase Tree Display for Variation: WBVar02131073

WBVar02131073 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h4239
    Other_name: Y54G9A.3a.1:c.124-2149A>T
      Y54G9A.3a.2:c.124-2149A>T
    HGVSg: CHROMOSOME_II:g.13706304A>T
  Sequence_details: SMap: S_parent: Sequence: Y54G9A
    Flanking_sequences: TAAAAAAATAAATTTCATGGTTCTCAATATACAATTTAAA TAACAAAATCTGAAATTTTTCGAGCTGAATTTTTTTGAAA
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 13706213 13706213
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023795
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00002235
    Transcript: Y54G9A.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G9A.3a.1:c.124-2149A>T
        Intron_number: 2/9
      Y54G9A.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G9A.3a.2:c.124-2149A>T
        Intron_number: 3/10
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose