WormBase Tree Display for Variation: WBVar02130945

WBVar02130945 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12575
    Other_name: CE21971:p.Leu1157=
      Y46G5A.4.1:c.3471G>A
    HGVSg: CHROMOSOME_II:g.12733118C>T
  Sequence_details: SMap: S_parent: Sequence: Y46G5A
    Flanking_sequences: TGAACTTGAAGAGCGGCTTTCCCATCTTCGGCATCTTAAT AAATCTCCCAGCTGGTGTTGATCCAAGTCATACAGTCTAT
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 12733027 12733027
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023858
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00012896
    Transcript: Y46G5A.4.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y46G5A.4.1:c.3471G>A
        HGVSp: CE21971:p.Leu1157=
        cDNA_position: 3506
        CDS_position: 3471
        Protein_position: 1157
        Exon_number: 6/14
        Codon_change: ttG/ttA
        Amino_acid_change: L
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose