WormBase Tree Display for Variation: WBVar02130685
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| WBVar02130685 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h16290 | ||||
| Other_name | C09D8.1m.1:c.1403-904C>T | |||||
| C09D8.1f.1:c.2318-904C>T | ||||||
| C09D8.1n.1:c.1331-904C>T | ||||||
| C09D8.1a.1:c.2246-904C>T | ||||||
| C09D8.1k.1:c.1916-904C>T | ||||||
| C09D8.1l.1:c.1988-904C>T | ||||||
| C09D8.1e.1:c.1661-904C>T | ||||||
| C09D8.1d.1:c.1733-904C>T | ||||||
| C09D8.1i.1:c.2378-904C>T | ||||||
| C09D8.1j.1:c.2450-904C>T | ||||||
| HGVSg | CHROMOSOME_II:g.10992991C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | C09D8 | ||
| Flanking_sequences | CTCTTCAACTTTGAAATTAAAAAAAAAAAAAATTCATTGT | AATTTTGATATCTCAAATTTTTCAAAATTTCCTATTAGTC | ||||
| Mapping_target | CHROMOSOME_II | |||||
| Source_location | 200 | CHROMOSOME_II | 10992915 | 10992915 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023752 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00004215 | ||||
| Transcript | C09D8.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1j.1:c.2450-904C>T | |||||
| Intron_number | 14/28 | |||||
| C09D8.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1e.1:c.1661-904C>T | |||||
| Intron_number | 11/26 | |||||
| C09D8.1i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1i.1:c.2378-904C>T | |||||
| Intron_number | 13/27 | |||||
| C09D8.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1a.1:c.2246-904C>T | |||||
| Intron_number | 13/28 | |||||
| C09D8.1n.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1n.1:c.1331-904C>T | |||||
| Intron_number | 10/24 | |||||
| C09D8.1k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1k.1:c.1916-904C>T | |||||
| Intron_number | 13/27 | |||||
| C09D8.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1d.1:c.1733-904C>T | |||||
| Intron_number | 11/25 | |||||
| C09D8.1f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1f.1:c.2318-904C>T | |||||
| Intron_number | 14/28 | |||||
| C09D8.1m.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1m.1:c.1403-904C>T | |||||
| Intron_number | 12/27 | |||||
| C09D8.1l.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D8.1l.1:c.1988-904C>T | |||||
| Intron_number | 14/29 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
