WormBase Tree Display for Variation: WBVar02130556
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WBVar02130556 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h14143 | ||||
Other_name | CE47030:p.Thr740= | |||||
C08H9.3a.1:c.2220G>A | ||||||
HGVSg | CHROMOSOME_II:g.9882929C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C08H9 | ||
Flanking_sequences | GACGTCTAGACTCTAGATCGGCAGCTCGAATTGGCTCAAT | GTCGTGTTGTTGAGCAAAAGTTGTGAGCAAATTTCAGTGG | ||||
Mapping_target | CHROMOSOME_II | |||||
Source_location | 200 | CHROMOSOME_II | 9882852 | 9882852 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023854 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00007464 | ||||
Transcript | C08H9.3a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | C08H9.3a.1:c.2220G>A | |||||
HGVSp | CE47030:p.Thr740= | |||||
cDNA_position | 2224 | |||||
CDS_position | 2220 | |||||
Protein_position | 740 | |||||
Exon_number | 14/15 | |||||
Codon_change | acG/acA | |||||
Amino_acid_change | T | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |