WormBase Tree Display for Variation: WBVar02130103

WBVar02130103 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8908
    Other_name: K06A1.6c.1:c.680+1530G>A
      K06A1.6a.1:c.533+1530G>A
      K06A1.6d.1:c.347+1530G>A
      K06A1.6b.1:c.545+1530G>A
    HGVSg: CHROMOSOME_II:g.6463998C>T
  Sequence_details: SMap: S_parent: Sequence: K06A1
    Flanking_sequences: ATTGTATGGCATTTTGTTAAATTAAACTTCCATGAAAACG CTAGTTCGAAGTTCTGGGCCCTTTAGAACTTCTAGTGATG
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 6463949 6463949
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023693
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00019428
    Transcript: K06A1.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A1.6a.1:c.533+1530G>A
        Intron_number: 5/15
      K06A1.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A1.6c.1:c.680+1530G>A
        Intron_number: 6/16
      K06A1.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A1.6b.1:c.545+1530G>A
        Intron_number: 5/15
      K06A1.6d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A1.6d.1:c.347+1530G>A
        Intron_number: 2/11
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose