WormBase Tree Display for Variation: WBVar02129743

WBVar02129743 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h9202
    Other_name: CE36007:p.Leu107=
      R11F4.2b.1:c.319C>T
      CE33433:p.Leu107=
      R11F4.2a.1:c.319C>T
    HGVSg: CHROMOSOME_II:g.4083859C>T
  Sequence_details: SMap: S_parent: Sequence: R11F4
    Flanking_sequences: ACTTGCTCTCTCACAAACCTCAATGACTTTCTCATGCTAC TGATCATCCTGGCGACCATCGAGCGATATCTGATCACACT
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 4083853 4083853
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023682
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00020008
    Transcript: R11F4.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: R11F4.2b.1:c.319C>T
        HGVSp: CE36007:p.Leu107=
        cDNA_position: 358
        CDS_position: 319
        Protein_position: 107
        Exon_number: 3/8
        Codon_change: Ctg/Ttg
        Amino_acid_change: L
      R11F4.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: R11F4.2a.1:c.319C>T
        HGVSp: CE33433:p.Leu107=
        cDNA_position: 319
        CDS_position: 319
        Protein_position: 107
        Exon_number: 2/6
        Codon_change: Ctg/Ttg
        Amino_acid_change: L
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose