WormBase Tree Display for Variation: WBVar02129199

WBVar02129199 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h11457
    Other_name: T01D1.8b.1:c.134+1789G>A
      T01D1.8a.2:c.-152+1787G>A
      T01D1.5.1:c.171+134C>T
      T01D1.8a.1:c.-152+1789G>A
    HGVSg: CHROMOSOME_II:g.188763G>A
  Sequence_details: SMap: S_parent: Sequence: T01D1
    Flanking_sequences: AAATTGTGATCAGTGCACTACTTTAAAAGCCCATAAAATT CTCCAAATGGCAATTTTTGAAAATTTTTATGATTTTTAGG
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 188763 188763
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023856
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00020150
      WBGene00305573
      WBGene00044641
    Transcript: T01D1.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D1.8a.1:c.-152+1789G>A
        Intron_number: 1/5
      T01D1.8a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D1.8a.2:c.-152+1787G>A
        Intron_number: 1/5
      T01D1.8b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D1.8b.1:c.134+1789G>A
        Intron_number: 2/4
      T01D1.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D1.5.1:c.171+134C>T
        Intron_number: 1/4
      T01D1.9
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose