WormBase Tree Display for Variation: WBVar02129067
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| WBVar02129067 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h8663 | ||||
| Other_name | CE25174:p.Pro221Ser | |||||
| Y105E8A.10c.1:c.661C>T | ||||||
| CE36895:p.Pro229Ser | ||||||
| CE29831:p.Pro258Ser | ||||||
| Y105E8A.10c.2:c.661C>T | ||||||
| Y105E8A.10b.1:c.685C>T | ||||||
| Y105E8A.10a.1:c.772C>T | ||||||
| HGVSg | CHROMOSOME_I:g.14424972C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | Y105E8A | ||
| Flanking_sequences | GTCTCCGGTACTTCCACATAATTATGAGGATACTACCTAC | CTGTATGCCTATTTCTGATCGATGTTGAAAATGGCGGCTC | ||||
| Mapping_target | CHROMOSOME_I | |||||
| Source_location | 200 | CHROMOSOME_I | 14424959 | 14424959 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023676 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00013670 | ||||
| Transcript | Y105E8A.10b.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | |||||
| HGVSc | Y105E8A.10b.1:c.685C>T | |||||
| HGVSp | CE36895:p.Pro229Ser | |||||
| cDNA_position | 750 | |||||
| CDS_position | 685 | |||||
| Protein_position | 229 | |||||
| Exon_number | 5/11 | |||||
| Codon_change | Cct/Tct | |||||
| Amino_acid_change | P/S | |||||
| Y105E8A.10c.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | |||||
| HGVSc | Y105E8A.10c.1:c.661C>T | |||||
| HGVSp | CE25174:p.Pro221Ser | |||||
| cDNA_position | 728 | |||||
| CDS_position | 661 | |||||
| Protein_position | 221 | |||||
| Exon_number | 5/11 | |||||
| Codon_change | Cct/Tct | |||||
| Amino_acid_change | P/S | |||||
| Y105E8A.10a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | |||||
| HGVSc | Y105E8A.10a.1:c.772C>T | |||||
| HGVSp | CE29831:p.Pro258Ser | |||||
| cDNA_position | 772 | |||||
| CDS_position | 772 | |||||
| Protein_position | 258 | |||||
| Exon_number | 4/10 | |||||
| Codon_change | Cct/Tct | |||||
| Amino_acid_change | P/S | |||||
| Y105E8A.10c.2 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | |||||
| HGVSc | Y105E8A.10c.2:c.661C>T | |||||
| HGVSp | CE25174:p.Pro221Ser | |||||
| cDNA_position | 664 | |||||
| CDS_position | 661 | |||||
| Protein_position | 221 | |||||
| Exon_number | 4/10 | |||||
| Codon_change | Cct/Tct | |||||
| Amino_acid_change | P/S | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
