WormBase Tree Display for Variation: WBVar02127393

WBVar02127393 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h9343
    Other_name: C24A11.8c.1:c.949-1G>A
      C24A11.8b.2:c.949-1G>A
      C24A11.8a.2:c.925-1G>A
      C24A11.8b.1:c.949-1G>A
      C24A11.8a.1:c.925-1G>A
    HGVSg: CHROMOSOME_I:g.5406109C>T
  Sequence_details: SMap: S_parent: Sequence: C24A11
    Flanking_sequences: GACCCGATGGACAAGTGTATTTCAGAGTCAGCGGTTTCTT TGAAGAAAACATTATTAGTAAAAATTTTAAAATGATAATT
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 5406112 5406112
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023675
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00001491
    Transcript: C24A11.8a.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C24A11.8a.1:c.925-1G>A
        Intron_number: 9/17
      C24A11.8b.2 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C24A11.8b.2:c.949-1G>A
        Intron_number: 10/18
      C24A11.8a.2 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C24A11.8a.2:c.925-1G>A
        Intron_number: 10/18
      C24A11.8c.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C24A11.8c.1:c.949-1G>A
        Intron_number: 10/19
      C24A11.8b.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C24A11.8b.1:c.949-1G>A
        Intron_number: 11/19
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose