WormBase Tree Display for Variation: WBVar02127305

WBVar02127305 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h11630
    Other_name (12)
    HGVSg: CHROMOSOME_I:g.5066169A>T
  Sequence_details: SMap: S_parent: Sequence: C30F8
    Flanking_sequences: CTGGTGAAGTGTACCATTTTGGTTTGATTTCCGGAAATTG AATGTAGAAGACGTGGAGGGCTCGTACGGTTTTGGTGCAC
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 5066172 5066172
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023706
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00016735
    Transcript: C46H11.11g.1 (11)
      C46H11.11e.1 (12)
      C46H11.11f.1 (12)
      C46H11.11d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.11d.1:c.309-881T>A
        Intron_number: 3/18
      C46H11.11b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.11b.1:c.309-881T>A
        Intron_number: 3/17
      C46H11.11c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.11c.1:c.309-881T>A
        Intron_number: 2/17
      C46H11.11h.1 (11)
      C46H11.11a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.11a.1:c.309-881T>A
        Intron_number: 3/18
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose