WormBase Tree Display for Variation: WBVar02127139
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WBVar02127139 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h14321 | ||||
Other_name | C41D11.3b.4:c.-836A>G | |||||
C41D11.3b.2:c.-836A>G | ||||||
C41D11.3c.1:c.332A>G | ||||||
C41D11.3b.3:c.-836A>G | ||||||
CE50047:p.His109Arg | ||||||
CE50015:p.His111Arg | ||||||
C41D11.3b.1:c.-836A>G | ||||||
C41D11.3d.1:c.326A>G | ||||||
C41D11.3a.1:c.-836A>G | ||||||
HGVSg | CHROMOSOME_I:g.4443833T>C | |||||
Sequence_details | SMap | S_parent | Sequence | C41D11 | ||
Flanking_sequences | TGGAATACTCTCCGGAGCCAGTTTTCGGATCGGTGTCTGG | GGTCCTGTTCTATCCGCAATGGAACCATTGGCTTTTTCTC | ||||
Mapping_target | CHROMOSOME_I | |||||
Source_location | 200 | CHROMOSOME_I | 4443834 | 4443834 | ||
Type_of_mutation | Substitution | T | C | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023861 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00016562 | ||||
Transcript | C41D11.3b.4 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C41D11.3b.4:c.-836A>G | |||||
cDNA_position | 277 | |||||
Exon_number | 2/13 | |||||
C41D11.3b.1 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C41D11.3b.1:c.-836A>G | |||||
cDNA_position | 332 | |||||
Exon_number | 3/14 | |||||
C41D11.3a.1 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C41D11.3a.1:c.-836A>G | |||||
cDNA_position | 334 | |||||
Exon_number | 3/12 | |||||
C41D11.3d.1 (12) | ||||||
C41D11.3b.2 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C41D11.3b.2:c.-836A>G | |||||
cDNA_position | 333 | |||||
Exon_number | 3/14 | |||||
C41D11.3c.1 (12) | ||||||
C41D11.3b.3 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C41D11.3b.3:c.-836A>G | |||||
cDNA_position | 292 | |||||
Exon_number | 2/13 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |