WormBase Tree Display for Variation: WBVar02126884

WBVar02126884 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h3206
    Other_name (16)
    HGVSg: CHROMOSOME_I:g.3398517C>T
  Sequence_details: SMap: S_parent: Sequence: F25F1
    Flanking_sequences: TTTGCTCGACGACAATTAGCTTCTCTGTTTCCACCTGACT TTCTTCCGTGGTTTCCTTCGTACCTGTGAGCCCGATCGGC
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 3398518 3398518
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023785
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021036
    Transcript: W05F2.4h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4h.1:c.1269G>A
        HGVSp: CE54464:p.Lys423=
        cDNA_position: 1269
        CDS_position: 1269
        Protein_position: 423
        Exon_number: 12/36
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4a.1:c.1134G>A
        HGVSp: CE45816:p.Lys378=
        cDNA_position: 1187
        CDS_position: 1134
        Protein_position: 378
        Exon_number: 13/38
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4i.1:c.1134G>A
        HGVSp: CE54498:p.Lys378=
        cDNA_position: 1134
        CDS_position: 1134
        Protein_position: 378
        Exon_number: 12/36
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4f.1:c.1269G>A
        HGVSp: CE54414:p.Lys423=
        cDNA_position: 1269
        CDS_position: 1269
        Protein_position: 423
        Exon_number: 12/35
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4g.1:c.1134G>A
        HGVSp: CE54423:p.Lys378=
        cDNA_position: 1134
        CDS_position: 1134
        Protein_position: 378
        Exon_number: 12/35
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4k.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4k.1:c.1134G>A
        HGVSp: CE54410:p.Lys378=
        cDNA_position: 1134
        CDS_position: 1134
        Protein_position: 378
        Exon_number: 12/35
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4j.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4j.1:c.1269G>A
        HGVSp: CE54401:p.Lys423=
        cDNA_position: 1269
        CDS_position: 1269
        Protein_position: 423
        Exon_number: 12/35
        Codon_change: aaG/aaA
        Amino_acid_change: K
      W05F2.4e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W05F2.4e.1:c.1269G>A
        HGVSp: CE54507:p.Lys423=
        cDNA_position: 1269
        CDS_position: 1269
        Protein_position: 423
        Exon_number: 12/36
        Codon_change: aaG/aaA
        Amino_acid_change: K
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose