WormBase Tree Display for Variation: WBVar02126855

WBVar02126855 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h5900
    Other_name: Y44E3A.2.2:c.539+1G>A
      Y44E3A.2.1:c.539+1G>A
    HGVSg: CHROMOSOME_I:g.3305943C>T
  Sequence_details: SMap: S_parent: Sequence: Y44E3A
    Flanking_sequences: AGAGCCTAACCTAACATTCCCTCACTACATCAAAGGTTCA CTGTAATTCACATTGACCACGATTGTGTGCTCCTTCGCAG
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 3305944 3305944
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023685
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00000036
    Transcript: Y44E3A.2.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: Y44E3A.2.1:c.539+1G>A
        Intron_number: 5/11
      Y44E3A.2.2 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: Y44E3A.2.2:c.539+1G>A
        Intron_number: 4/10
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose