WormBase Tree Display for Variation: WBVar02126231

WBVar02126231 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h4857
    Other_name: Y48G8AR.1b.1:c.1510-1169G>A
      Y48G8AR.1a.1:c.1510-1169G>A
      Y48G8AR.1c.1:c.391-1169G>A
    HGVSg: CHROMOSOME_I:g.1260840C>T
  Sequence_details: SMap: S_parent: Sequence: Y48G8AR
    Flanking_sequences: CCTTTCTCCCGCATTTTTTGTAAATCAACGTAGATCAAAC GAAATGAGACACTCTGACAGTGTCAGGGGTGTGAGGGAAA
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 1260841 1260841
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023666
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00001707
    Transcript: Y48G8AR.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G8AR.1a.1:c.1510-1169G>A
        Intron_number: 8/9
      Y48G8AR.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G8AR.1c.1:c.391-1169G>A
        Intron_number: 3/3
      Y48G8AR.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G8AR.1b.1:c.1510-1169G>A
        Intron_number: 7/8
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose