WormBase Tree Display for Variation: WBVar02125092
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| WBVar02125092 | Evidence | Paper_evidence | WBPaper00044134 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | jj59 | |||||
| Other_name | CE25115:p.Gln628Ter | ||||||
| T19B4.7.1:c.1882C>T | |||||||
| HGVSg | CHROMOSOME_I:g.5684503G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | T19B4 | |||
| Flanking_sequences | ctttcaagtgatactgtgaaagtacgaaca | aatccgatgaaccatcagcaccgcctgtaa | |||||
| Mapping_target | T19B4 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00044134 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | LW | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006776 | |||||
| Transcript | T19B4.7.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | T19B4.7.1:c.1882C>T | ||||||
| HGVSp | CE25115:p.Gln628Ter | ||||||
| cDNA_position | 1945 | ||||||
| CDS_position | 1882 | ||||||
| Protein_position | 628 | ||||||
| Exon_number | 12/19 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 0.309137 | ||||
| Description | Phenotype | WBPhenotype:0000229 | Paper_evidence | WBPaper00044134 | |||
| Curator_confirmed | WBPerson1659 | ||||||
| Remark | Table 3 | Paper_evidence | WBPaper00044134 | ||||
| Curator_confirmed | WBPerson1659 | ||||||
| Reference | WBPaper00044134 | ||||||
| WBPaper00046810 | |||||||
| Method | Substitution_allele |
